Integrated mRNA and small RNA sequencing reveals microRNA regulatory network associated with internode elongation in sugarcane (Saccharum officinarum L.)
نویسندگان
چکیده
منابع مشابه
Tissue Culture Strategies in Sugarcane (saccharum Officinarum L.)
Sugarcane (Saccharum officinarum L.) has wide range of economic importance due to its major and by-products. Seed multiplication of newly released varieties of sugarcane is one of the major constraints. Once a desired clone is identified, it usually takes 6-7 years to produce sufficient quality of improved seed material. This long duration causes a major bottleneck in breeding programmes. For t...
متن کاملCloning, expression and characterization of sugarcane (Saccharum officinarum L.) transketolase.
Pentose phosphate pathway (PPP) composed of two functionally-connected phases, the oxidative and non-oxidative phase. Both phases catalysed by a series of enzymes. Transketolase is one of key enzymes of non-oxidative phase in which transfer two carbon units from fructose-6-phosphate to erythrose-4-phosphate and convert glyceraldehyde-3-phosphate to xylulose-5-phosphate. In plant, erythrose-4-ph...
متن کاملGenetic diversity and relationships in native Hawaiian Saccharum officinarum sugarcane.
Commercial sugarcane hybrid cultivars currently in production are high-yielding, disease-resistant, millable canes and are the result of years of breeding work. In Hawaii, these commercial hybrids are quite distinct from many Saccharum officinarum canes still in existence that were brought to the islands and cultivated by the native Polynesians. The actual genetic relationships among the native...
متن کاملIntegrated mRNA and microRNA transcriptome sequencing characterizes sequence variants and mRNA–microRNA regulatory network in nasopharyngeal carcinoma model systems☆
Nasopharyngeal carcinoma (NPC) is a prevalent malignancy in Southeast Asia among the Chinese population. Aberrant regulation of transcripts has been implicated in many types of cancers including NPC. Herein, we characterized mRNA and miRNA transcriptomes by RNA sequencing (RNASeq) of NPC model systems. Matched total mRNA and small RNA of undifferentiated Epstein-Barr virus (EBV)-positive NPC xe...
متن کاملLine x tester analysis in sugarcane (Saccharum officinarum)
Combining ability variances and effects were estimated for important agronomic and biochemical traits in sugarcane using line x tester mating design. Five commercially grown varieties and one line from germplasm collection were involved in this study of which three were used as females (lines) and three as males (testers). The six agronomic characters studied were number of millable stalk per s...
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ژورنال
عنوان ژورنال: BMC Genomics
سال: 2019
ISSN: 1471-2164
DOI: 10.1186/s12864-019-6201-4